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Next Generation Sequencing Data

CBIO has been involved with several NGS projects. Detailed workflows for the most popular projects are shown below. 

Full genome and exome analysis

  • Quality control, mapping, post processing, variant calling

 

16S rRNA diversity analysis

  • Quality control , processing and analysis using QIIME and R modules

Other processing

  • Detecting sequence contamination
  • Running large BLASTs and doing report filtering and formatting