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Publications 2008

  1. Nembaware V, Lupindo B, Schouest K, Spillane C, Scheffler K, Seoighe C, "Genome-wide survey of allele-specific splicing in humans", BMC Genomics. 2008, 9:265
  2. Keele BF, Giorgi EE, Salazar-Gonzalez JF, Decker JM, Pham KT, Salazar MG, Sun C, Grayson T, Wang S, Li H, Wei X, Jiang C, Kirchherr JL, Gao F, Anderson JA, Ping LH, Swanstrom R, Tomaras GD, Blattner WA, Goepfert PA, Kilby JM, Saag MS, Delwart EL, Busch MP, Cohen MS, Montefiori DC, Haynes BF, Gaschen B, Athreya GS, Lee HY, Wood N, Seoighe C, Perelson AS, Bhattacharya T, Korber BT, Hahn BH, Shaw GM, "Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection", Proc Natl Acad Sci U S A. 2008, 105(21):7552-7.
  3. Chopera DR, Woodman Z, Mlisana K, Mlotshwa M, Martin DP, Seoighe C, Treurnicht F, de Rosa DA, Hide W, Karim SA, Gray CM, Williamson C; CAPRISA 002 Study Team, "Transmission of HIV-1 CTL escape variants provides HLA-mismatched recipients with a survival advantage", PLoS Pathog. 2008, 4(3):e1000033.
  4. Poulter GL, Rubin DL, Altman RB, Seoighe C, "MScanner: a classifier for retrieving Medline citations", BMC Bioinformatics 2008, 9:108.
  5. M. Kuttel, "Conformational free energy maps for globobiose (_-D-Gal-(1-4)-_-D-Gal) in implicit and explicit aqueous solution", Carbohyd. Res. 2008, 343(6):1091-8.
  6. Ngandu NK, Scheffler K, Moore P, Woodman Z, Martin D, Seoighe C, "Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences", Virol J. 2008, 5:160
  7. Delport W, Scheffler K, Seoighe C, "Frequent toggling between alternative amino acids is driven by selection in HIV-1", PLoS Pathog. 2008, 4(12):e1000242.